A collaboratively written review paper on deep learning, genomics, and precision medicine

📜 🎉 Automated reporting of objects in R

papaja (Preparing APA Journal Articles) is an R package that provides document formats to produce complete APA manuscripts from RMarkdown-files (PDF and Word documents) and helper functions that facilitate reporting statistics, tables, and plots.

An R-tool for comprehensive science mapping analysis. A package for quantitative research in scientometrics and bibliometrics.

Clone me to create your Manubot manuscript

Minimalist LaTeX template for academic papers

Ten Quick Tips for Deep Learning in Biology

Agent Skills for medical research — literature search, reporting-guideline & citation checks, statistics, publication figures, submission. Works with Claude Code, Codex, Cursor & GitHub Copilot. Built by a physician-researcher, tested on real publications. MIT.

📚 Virtual Intelligent Publishing Assistant (Vipa): A journal management and publishing software

A collaborative review of the emerging COVID-19 literature. Join the chat here:

Extracting and quantifying graphical representations of river and delta channel networks from binary masks

A checklist to help you avoid all those minor errors when submitting a scientific manuscript

AutoLayoutKit in pure Swift.

Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · 2016

AI长篇小说工程化写作流水线 — SQLite记忆、21道Guard门禁、Agent陪审团、防幻觉检查、多小说独立数据库、人工味质量层

A repository to practice contributing to a Manubot manuscript

📓 Non-parametric Bayesian Inference for Conservation Decisions

Claude Code skill for academic manuscript writing: IMRAD workflows, literature matrices, tables/figures, and tested utilities.

Delineating watershed basins and computing attribute statistics using Google Earth Engine

The definitive MCP server for Scrivener — connect your novels, screenplays, and manuscripts to Claude, ChatGPT, and any AI assistant. 53 tools: document management, writing analysis, content enhancement, offline semantic search, and character/plot tracking.