This repository contains all CWL descriptions of the MGnify pipeline version 5.0.
Dadaist2 🟨 Highway to R
A web app for environmental DNA metabarcoding analysis
Automated virus amplicon sequencing analysis program integrated with Nextflow pipeline manager.
amplicon analysisng pipelines based on luigi with qiime2-dada2/ qiime2-deblur/vsearch/usearch
A pipeline to analyse marine fish amplicon data
Nanopore sequencing-based Amplicon Pipeline: optimised for full-length, 16S and 18S mixed amplicon datasets, in a fast and computationally efficient manner, setup for use of 515Y/926R primers, but also compatible with other cross-domain primers.
An End-to-End GUI for real-time taxon identification via barcoded nanopore amplicon sequencing data. The pipeline is built using R Shiny library and majorly targets users with minimal coding background. Users can get from sequencing to results in a few clicks.
TEIXEIRA, J. V. A.; SOUZA, E. C. Use of microbial fuel cell systems in wastewater treatment in connection with bioenergy generation. Desafios. Revista Interdisciplinar da Universidade Federal do Tocantins. Palmas, 2025. DOI: // Microbial fuel cells: Unveiling microbial diversity for sustainable wastewater treatment and bioenergy production
Snakemake workflow to process circRNA AmpliconSeq datasets generated to study circRNAs in KSHV and human hosts using divergent primers.
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