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Commits on May 2, 2014

• Fix parsing of SCOP 1.71 (#115)

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Commits on Apr 4, 2014

• Better handling of exceptions in parsers, towards goal #111

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Commits on Apr 3, 2014

• Fixing test after latest changes

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Commits on Mar 27, 2014

• less verbose test

  andreasprlic

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• don't specify tmp file names for AtomCache. It does that automatically. Also: /tmp does not exist on windows.

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• don't specify tmp file names for AtomCache. It does that automatically. Also: /tmp does not exist on windows.

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• Adding some more tests for different parsing issues

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  josemduarte

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• New test for experimental techniques parsing

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  josemduarte

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• New test for raw pdb files + fixes to isNmr heuristics

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• Test is now completely silent

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• Reducing verbosity of test, switch to full output setting VERBOSE=true

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• Added test for crystal info and some small fixes

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• Implemented full treatment of xtal info and experimental technique

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  josemduarte

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Commits on Mar 25, 2014

• also moving files needed for tests

  andreasprlic

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Commits on Mar 24, 2014

• more refactoring of junit tests, slow tests go to integration test module

  andreasprlic

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• moving slow running unit tests into integrationtests package

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Commits on Mar 21, 2014

• need to make sure the setup is called before every test, if run the first time, otherwise problems with seqres alignment #106

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Commits on Mar 18, 2014

• resolving #76 fixing problem when parsing altLocs

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• Improving TestAltLocs and fixing issue with SiftsChainToUniprotMapping

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  josemduarte

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Commits on Mar 3, 2014

• Merge branch 'master' of https://github.com/biojava/biojava

  josemduarte

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• Full implementation of ASA calculation including a unit test

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• Undoing bf4787bc:

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  sbliven

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Commits on Feb 28, 2014

• a couple of more fixes to the junit tests for #76

  andreasprlic

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• fixing #76

  andreasprlic

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• fixing #76

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Commits on Feb 22, 2014

• Add junit Assumption for SCOP reachability

  sbliven

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Commits on Feb 17, 2014

• Update the versions tested by BerkeleyScopInstallationTest

  sbliven

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Commits on Jan 25, 2014

• Didn't mean to push previous commit to main.

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• Moved CeSymm and some related classes to biojava-structure.

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Commits on Jan 19, 2014

• Work on issue #81: Made CathDomain implement StructureIdentifier.

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Commits on Dec 29, 2013

• Wrote SiftsChainToUniprotMapping, SiftsChainEntry, and a corresponding

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  dmyersturnbull

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Commits on Dec 2, 2013

• small cleanup

  

  Andreas Prlic

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Commits on Nov 29, 2013

• removing external dependency on log4j

  andreasprlic

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Commits on Nov 4, 2013

• uncommenting version 1.75B and .175C until #69 gets resolved

  

  Andreas Prlic

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Commits on Nov 2, 2013

• adding a unit test fot #68

  andreasprlic

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