Julia and Python complex system applications in ecology, epidemiology, sociology, economics & finance; network science models including Bianconi-Barabási, Barabási-Albert, Watts-Strogatz, Waxman Model & Erdős-Rényi; graph theory algorithms involving Gillespie, Bron Kerbosch, Ramsey, Bellman Ford, A*, Kruskal, Borůvka, Prim, Dijkstra, DSatur, Ran…

CovsirPhy: Python library for COVID-19 analysis with phase-dependent SIR-derived ODE models.

Python Virus Simulation: Model and visualize epidemic spread using mathematical models (SIR) and interactive dashboards.

A simple SIR model in Python

Codes for the paper "A Time-dependent SIR model for COVID-19 with Undetectable Infected Persons"

Development version of phaseR, an R package for phase plane analysis of one- and two-dimensional autonomous ODE systems

Stochastic SIR models; adding age-structures and social contact data for the spread of covid-19. Lattice model for identifying and isolating hotspots. This has been further developed into a network(graph) of multiple clusters(lattices) and tracing the infection in such a population.

MetaWards disease metapopulation analysis and modelling software. Professional geographical SIR model with a flexible plugin architecture to support complex scenario modelling

A Mesa-based ABM library for epidemiological (SIR) modeling.

A virus simulation for pandemics based on the SIR-network concept.

A general framework for quick epidemiological ABM models

Files related to my Summer of Science Report on Nonlinear Dynamics

A GitHub repo for the generation of a network model to represent society with various components, the spread of the disease on this network, and the calculation of reproduction number on these simulation results.

Python SIR-x model implementation

CS302 Modelling and Simulation Weekly Assignments in python based on modelling different systems - SARS, Malaria, SIR

Simulation of a SIR Epidemic process on the Gnutella p2p network on Python

tsiR: An R package for time-series Susceptible-Infected-Recovered models of epidemics

Homework and exercises from course Network Dynamics and Learning - PoliTo

Macroeconomic dynamics and reallocation in an epidemic

[Computer Modeling] SIR/SIRS/SIRQ/ISIR/SEIR compartmental models for numerical epidemic modelling in MATLAB.