Our project dedicated to finding microorganisms able to destruct PET plastic (having enzymes homologous to PETase and MHETase)
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Dec 20, 2020 - HTML
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philogenetic-trees
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This pipeline automates the process of generating phylogenetic trees from sequence data, specifically designed for high-throughput and efficient analysis.
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May 19, 2024 - Python
Parallel and sequential algorithms for finding philogenetic trees using Maximum Parsimony. The scoring algorithm used is Fitch scoring algorithm. Exhaustive search and Branch and Bound search algorithms are implemented in sequential variant. SPMD method is used in parallel implementation.
matlab parallel branch-and-bound scoring-algorithm exhaustive-search fitch-scoring-algorithm bound-search philogenetic-trees maximum-parsimony
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Oct 2, 2017 - MATLAB
Project for the master course: Introduction to bioinformatics
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Apr 6, 2020 - HTML
Algorithm to parse, assemble and align genomic sequences by use machine learning techniques. The resulting sequences are used to form NCBI-BLAST respects and return sequence homologs.
machine-learning bioinformatics-pipeline biopython de-novo-assembly homology philogenetic-trees alignment-algorithm graph-theory-algorithms
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Apr 2, 2025 - Python
MATLAB Live Script files for Applied Bioinformatics
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Nov 26, 2023
Genomic Analysis of Canis lupus with the use of Genomic Maps and Philogenetic Trees
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Jun 30, 2023
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