Diff-UNet: A Diffusion Embedded Network for Volumetric Segmentation. (using diffusion for 3D medical image segmentation)
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Mar 22, 2024 - Python
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brats2020
Here are 32 public repositories matching this topic...
Multimodal Brain mpMRI segmentation on BraTS 2023 and BraTS 2021 datasets.
machine-learning computer-vision deep-learning medical-imaging segmentation synapse medical-image-processing 3d-segmentation brain-tumor-segmentation organs brats18 segmentation-models brats17 brats2020 brats16 btcv brats23
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Mar 23, 2026 - Python
A complete pipeline for BraTS 2020
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May 29, 2022 - Python
3d unet and 3d autoencoder for automatical segmentation and feature extraction.
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Nov 17, 2020 - Python
PyTorch implementation of Two Pathway CNN and Cascaded architectures for automatic brain tumor segmentation on BraTS 2020 MRI dataset. Implements TwoPathCNN, InputCascadeCNN, LocalCascadeCNN, and MFCascadeCNN with two-phase training and fully convolutional inference.
deep-learning pytorch image-segmentation medical-image-analysis brain-tumor-segmentation mri-brain convolutional-neural-networks-cnn brats-dataset brats2020 convolutional-neural-networks-cpu two-pathway-cnn
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Apr 12, 2026 - Python
Training of Noise-to-Image Diffusion Model on Multi-Channel Brain Tumor MRI Scans.
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Jan 12, 2023 - Jupyter Notebook
Brain tumor segmentation
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Jun 13, 2022 - Python
Using the BraTS2020 dataset, we test several approaches for brain tumour segmentation such as developing novel models we call 3D-ONet and 3D-SphereNet, our own variant of 3D-UNet with more than one encoder-decoder paths.
computer-vision deep-learning pytorch unet brats brain-tumor-segmentation unet-3d unet-image-segmentation 3d-unet brats2020
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Apr 29, 2023 - Jupyter Notebook
Brain Tumor Image segmentation-Brats2019, 2020, 2021
python tensorflow jupyter-notebook segmentation unet unet-segmentation brats2019 brats2020 brats2021
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May 16, 2024 - Jupyter Notebook
mri image-segmentation medical-image-processing brain-tumor-segmentation unet-3d vnet3d resunet brats2020
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Mar 5, 2021 - Jupyter Notebook
3D Brain Tumor Segmentation using U-Net and MONAI on the BraTS 2020 dataset to optimize segmentation performance across multiple MRI modalities.
computer-vision deep-learning pytorch medical-imaging unet 3d-segmentation brain-tumor-segmentation unet-image-segmentation brats-dataset medical-imaging-with-deep-learning mri-analysis brats2020 monai
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Dec 20, 2025 - Python
PyTorch 2D U-Net for BraTS brain tumor segmentation (FLAIR+T1CE) with per-modality p99 normalization, CE+SoftDice loss, solid metrics, and a prediction visualizer.
python machine-learning computer-vision pytorch mri medical-imaging sqlite3 image-segmentation nifti unet semantic-segmentation deep-learing brain-tumor brain-tumor-segmentation brats2020 2d-unet
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Mar 15, 2026 - Python
A deep learning project for brain tumor classification and segmentation on MRI images using CNN, U-Net, and VIT models.
deep-learning cnn pytorch unet attention-mechanism tumor-detection tumor-segmentation tumor-classification brats2020 vision-transformer
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Nov 15, 2024 - Jupyter Notebook
discusses deep learning models for segmenting MRI images, specifically the UNET model for Brain Tumor Segmentation
attention-mechanism unet-image-segmentation unet-keras unet-model unet-segmentation brats-dataset brats-challenge brats2020
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Dec 18, 2023 - Python
End-to-end brain tumor segmentation on BraTS2020 with a modified DUCKNet (U-Net + DenseNet). Includes data preprocessing/augmentation, Keras training loops, and rigorous eval (Dice/IoU), achieving 88.7% validation Dice with 0.010 validation loss. Reproducible notebook and comparisons vs baseline U-Net; trained on A100.
python data machine-learning image supervised-learning imageprocessing neuralnetworks datacollection unet-image-segmentation datapreparation braintumorsegmentation modelevaluation brats2020 featureselection ducknet-tensorflow ducknet-keras datatraining ducknet
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Dec 6, 2024 - Jupyter Notebook
This project uses Gabor filters and 3D U-Net to detect and segment brain tumors from MRI scans using the BraTS 2020 dataset
python deep-learning mri medical-imaging segmentation semantic-segmentation multiresolution gabor-filters 3d-unet brain-tumor-detection brats2020
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Jan 4, 2025 - Python
Conducting multimodal semantic segmentation of brain tumor using 3D U-Net
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Oct 18, 2024 - Jupyter Notebook
3D U-Net for brain tumor segmentation on BraTS 2020 (.nii) data, adapted for interactive use with .npy files via a pre-trained model and Gradio interface. Includes preprocessing and custom architecture.
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Sep 14, 2025 - Jupyter Notebook
Multimodal Brain Tumor Segmentation
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Sep 22, 2023 - Jupyter Notebook
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