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Resource suggestion: bioinformatics and single-cell analysis tools

Status: Open.

#363 In seandavi/awesome-single-cell;

· zjg678 opened on May 8, 2026

mtSC: Integrating multiple references for single cell assignment

Status: Open.

#274 In seandavi/awesome-single-cell;

· mugpeng opened on Jul 15, 2022

CHETAH is published in NAR

Status: Open.

#255 In seandavi/awesome-single-cell;

· plijnzaad opened on Oct 18, 2021

Add some probabilistic modeling approaches / libs

Status: Open.

#254 In seandavi/awesome-single-cell;

· grisaitis opened on Sep 29, 2021

Please consider adding ACTIONet to the single cell package list

Status: Open.

#249 In seandavi/awesome-single-cell;

· annashcherbina opened on Jun 7, 2021

Add clustifyr package?

Status: Open.

#238 In seandavi/awesome-single-cell;

· agillen opened on Mar 5, 2021

are there any python-based scRNAseq simulators?

Status: Open.

#229 In seandavi/awesome-single-cell;

· chansigit opened on Oct 28, 2020

Package scedar is missing.

Status: Open.

#220 In seandavi/awesome-single-cell;

· taylordm opened on Sep 21, 2020

cell type calling database panglao db

Status: Open.

#197 In seandavi/awesome-single-cell;

· Gibbsdavidl opened on May 14, 2020

Supplement three review papers

Status: Open.

#194 In seandavi/awesome-single-cell;

· Cinderella0709 opened on Apr 21, 2020

Heres another one:

Status: Open.

#128 In seandavi/awesome-single-cell;

· DCGenomics opened on Sep 29, 2018