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BioJava 4.2.8

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@josemduarte josemduarte released this 06 Jul 22:03
biojava-4.2.8
dee8b41

BioJava 4.2.8 is compatible with Java 7 and 8.

About

BioJava 4.2.8 has been released and is available using Maven from Maven Central as well as manual download (see below). This is purely a bug fix release correcting issues found since the 4.2.7 release.

This release contains 15 commits from 3 contributors.

Bug fixes

  • Small additions to AlignedSequence in core module to better support pipelines that use 4.2.x
  • URLs adapted to latest RCSB PDB convention #682

Maven Download

BioJava 4.2.8 requires Maven for the build process. All BioJava jar files are available via Maven Central as of this release.

You can create a BioJava dependency by adding the following XML to your project pom.xml file:

            <dependencies>
                    <dependency>
                            <groupId>org.biojava</groupId>
                            <artifactId>biojava-core</artifactId>
                            <version>4.2.8</version>
                    </dependency>
                    <!-- other biojava jars as needed -->
            </dependencies>

Manual Download

Module Binary Jar Source Jar Javadoc Jar
biojava-core biojava-core-4.2.8.jar biojava-core-4.2.8-sources.jar biojava-core-4.2.8-javadoc.jar
biojava-alignment biojava-alignment-4.2.8.jar biojava-alignment-4.2.8-sources.jar biojava-alignment-4.2.8-javadoc.jar
biojava-genome biojava-genome-4.2.8.jar biojava-genome-4.2.8-sources.jar biojava-genome-4.2.8-javadoc.jar
biojava-structure biojava-structure-4.2.8.jar biojava-structure-4.2.8-sources.jar biojava-structure-4.2.8-javadoc.jar
biojava-structure-gui biojava-structure-gui-4.2.8.jar biojava-structure-gui-4.2.8-sources.jar biojava-structure-gui-4.2.8-javadoc.jar
biojava-phylo biojava-phylo-4.2.8.jar biojava-phylo-4.2.8-sources.jar biojava-phylo-4.2.8-javadoc.jar
biojava-modfinder biojava-modfinder-4.2.8.jar biojava-modfinder-4.2.8-sources.jar biojava-modfinder-4.2.8-javadoc.jar
biojava-ws biojava-ws-4.2.8.jar biojava-ws-4.2.8-sources.jar biojava-ws-4.2.8-javadoc.jar
biojava-aa-prop biojava-aa-prop-4.2.8.jar biojava-aa-prop-4.2.8-sources.jar biojava-aa-prop-4.2.8-javadoc.jar
biojava-ontology biojava-ontology-4.2.8.jar biojava-ontology-4.2.8-sources.jar biojava-ontology-4.2.8-javadoc.jar
biojava-survival biojava-survival-4.2.8.jar biojava-survival-4.2.8-sources.jar biojava-survival-4.2.8-javadoc.jar
biojava-protein-disorder biojava-protein-disorder-4.2.8.jar biojava-protein-disorder-4.2.8-sources.jar biojava-protein-disorder-4.2.8-javadoc.jar
biojava-sequencing biojava-sequencing-4.2.8.jar biojava-sequencing-4.2.8-sources.jar biojava-sequencing-4.2.8-javadoc.jar

Release Date

BioJava 4.2.8 has been released on July 6th, 2017

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