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Commits on Nov 19, 2021

[maven-release-plugin] prepare release biojava-6.0.1
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4904bdb
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Merge pull request #997 from richarda23/remove-mains-#966
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420747c
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Commits on Nov 18, 2021

fix typo in message
otter606
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3ddfb23
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Commits on Nov 16, 2021

update changelog with breaking api change
otter606
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45435a3
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add license to new files
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28c07c6
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turn exception to IAE
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1eaa00b
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convert old main method for insdbcparser to junit
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794de2c
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formatting/ self review
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8aec708
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Merge pull request #996 from sbliven/fix-jaxb
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ebb6eb0
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Commits on Nov 15, 2021

move uncompressinputstream main into demo class
otter606
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362a102
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move ProteinSequence main to junit
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43a533a
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move CasePreservingProteinSequenceCreator main to junit
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c3700d5
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remove FastaReader main
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3cc7e87
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remove FastaWriter main
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f9a0ea4
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remove GenbankWriter main
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2e87f55
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replace FastaGeneWriter main with unit test
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1e01c21
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remove GenericFastaHeaderParser main- duplicate of unit test
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c640463
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remove GenbankReaderHelper main
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b83e1b8
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remove FastaReaderHelper main
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d059751
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remove DNASequence main
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b81a3f6
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Commits on Nov 14, 2021

remove UniprotProxySequenceReader main
otter606
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19680a4
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remove GenbankProxySequenceReader main
otter606
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c1e7610
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update InsdcParserTest to use jupiter junit5 parameterized test
otter606
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195d3da
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convert InsdcParser main to unit test
otter606
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f48d701
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remove FileDownloadUtils main
otter606
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916afd4
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Commits on Nov 12, 2021

Switch jgrapht to 1.4.0
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sbliven
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a35d0b6
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Commits on Nov 11, 2021

Change dependencies for better java version compatibility
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sbliven
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f76b50b
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Commits on Nov 8, 2021

Merge pull request #995 from aalhossary/master
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Commits on Nov 7, 2021

Handling a missed corner case
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aalhossary
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d62c7e6
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Minor Miscellaneous formatting and import
aalhossary
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419d5f0
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AutoUnboxing instead of deprecated constructor
aalhossary
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9da6f27
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Commits on Oct 31, 2021

Removing travis CI files, now unused. Replaced by github workflow for now
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6a54e3a
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Removing unneded file, probably from svn times
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49d0ff6
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Moving file from root to dev dir where it should be
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4420064
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Commits on Oct 30, 2021

Undoing part of last commit that introduced a test issue
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aab5e37
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