Hi,

I am trying to get results of my own data with your model.

(1) According to the file "DeepAffinity_inference.sh", it seems that the number of lines for input protein sequences file and compound file must matches like below.

Is it mean that the number of each entity in both files have to be matched or literally the the number of lines of both files have to be matched?

(2) I got two files for my own data after following your manual.
Could you tell me if their entities' structure are correct for model input?

• CID_Smi_Feature:
  
• protein_grouped_finalPresentation
  

Thank you,
CallMeDek