Skip to content

Navigation Menu

Sign in
Appearance settings

Search code, repositories, users, issues, pull requests...

Provide feedback

We read every piece of feedback, and take your input very seriously.

Saved searches

Use saved searches to filter your results more quickly

Appearance settings
Kun Ren edited this page Apr 30, 2022 · 12 revisions

R Markdown document creation is supported with the following features:

  • Chunk highlighting
  • Chunk navigation commands (Select current chunk, go to previous/next chunks, etc.)
  • Chunk execution commands (Run current chunk, run above/below chunks, etc.)
  • Rmd render commands (Knit, Knit to PDF/HTML/All)
  • Live preview rmd (as html)
  • Create new draft from a template

File association

By default, Rmd files are open as Markdown documents. To enable R Markdown features, you need to associate *.Rmd files with rmd language. Add an entry Item *.Rmd and Value rmd in the VS Code settings editor:

image

or directly update settings.json with the following:

{
   "files.associations": {
     "*.Rmd": "rmd"
  }
}

Installing pandoc

pandoc is required to render R Markdown documents. Visit Installing pandoc for instructions.

You may need to restart VS Code for rmarkdown to be able to detect pandoc.

Editing R Markdown documents

Kapture 2020-10-28 at 22 25 08

Knitting R Markdown documents

R Markdown documents can be knit in a VSCode-R managed background process when using the knit command. Beyond the use of a background process, this has the following features:

  • Set knitr document directory
  • Knit progress tracking
  • Smart knitting

Set knitr document directory

By default, knitr evaluates documents as though they are the root folder. For instance, calling source in a document will use the document's folder as the working directory, not the document's workspace. This can be modified in VSCode-R, so as to tell knitr if we want to evaluate from the workspace root or the document directory.

setDirectory

Progress tracking

Knit progress is tracked via a progress bar, and can be viewed in the R Markdown output stream. Progress is determined by the percentages reported in the R Markdown output stream and may not be 100% accurate.

image

Smart knitting

The knit button is "smart" in that it checks the document and its workspace for context when knitting. For instance, if a document has a knit function defined in the YAML header, the knit button will call the custom function when knitting. This also works for R Markdown sites, where the knit button will call rmarkdown::render_site instead of rmarkdown::render.

Live rendering R Markdown documents

You can live preview R Markdown documents by pressing the "Open Preview to Side" button when focused on an R Markdown document.

preview

You can also preview a document by right-clicking it in the explorer and selecting preview.

You can also run the following code and a browser viewer will open with live rendering of the R Markdown document.

rmarkdown::run("your-rmd-document.Rmd")

Live previewing rendered R Markdown documents

When an R Markdown document is knit and rendered to an HTML file, Live Preview can be used to live preview the HTML document. It supports auto-refresh when the HTML file is updated.

Templates

You can run "R Markdown: New Draft" from the command palettes to create a new draft from an R Markdown template.

The following is a (incomplete) list of packages that provide R Markdown templates:

Clone this wiki locally

Morty Proxy This is a proxified and sanitized view of the page, visit original site.