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Pull requests: OpenFreeEnergy/openfe

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Pull requests list

Multi-leg HybridTop Protocols
#2093 opened Jul 24, 2026 by IAlibay Member • Draft
1 of 8 tasks
3
Change epsilon to 0.0 for state B water hydrogens in net charge hybri…
#2092 opened Jul 24, 2026 by IAlibay Member • Draft
8 tasks
3
support gzipped json files
#2091 opened Jul 22, 2026 by atravitz Contributor • Draft
8 tasks
1
[WIP] exorcist docs
#2076 opened Jul 14, 2026 by atravitz Contributor • Draft
8 tasks
7
Fix forward/reverse convergence analysis: slice by time, not by replica
#2059 opened Jul 1, 2026 by aqemia-benedict-tan Contributor • Draft
3 of 5 tasks
@IAlibay
support pydantic 3.13
#2058 opened Jun 30, 2026 by atravitz Contributor • Draft
2 of 8 tasks
@atravitz
3
Move structural analysis methods to child classes in SepTop Protocol
#2049 opened Jun 29, 2026 by IAlibay Member • Draft
1 of 7 tasks
1
1
Fix residue naming
#2042 opened Jun 25, 2026 by hannahbaumann Contributor Loading…
3 of 7 tasks
1
@IAlibay
68
[WIP] SepTop Boresch solvent prototype
#2028 opened Jun 19, 2026 by hannahbaumann Contributor • Draft
7 tasks
@hannahbaumann
1
Adding net charge support for ABFEs
#2022 opened Jun 17, 2026 by IAlibay Member • Draft
1 of 11 tasks
1
4
Support SmallMoleculeComponents as host in ABFE Protocol
#2020 opened Jun 17, 2026 by IAlibay Member Loading…
1 of 7 tasks
1
@IAlibay
3
Enable user defn boresch restraints in ABFE Protocol
#2019 opened Jun 16, 2026 by IAlibay Member Loading…
2 of 7 tasks
1
@IAlibay @hannahbaumann
12
Net charge abfe -fix alchemical ion selection heuristic
#1992 opened Jun 11, 2026 by aqemia-benedict-tan Contributor • Draft
1 task done
[WIP] warehouse: docs
#1988 opened Jun 5, 2026 by atravitz Contributor • Draft
3 of 7 tasks
12
Test Python 3.14
#1987 opened Jun 4, 2026 by mikemhenry Contributor Loading…
7 tasks
@mikemhenry
8
DNM: testing pint
#1983 opened May 29, 2026 by atravitz Contributor • Draft
7 tasks
1
epic: warehouse
#1864 opened Mar 5, 2026 by atravitz Contributor • Draft
1 of 7 tasks
@atravitz
3
[DNM] test to see if new numba solver works in openfe
#1843 opened Feb 12, 2026 by mikemhenry Contributor • Draft
7 tasks
@mikemhenry
6
feat: filesystem exorcist worker
#1833 opened Feb 7, 2026 by ethanholz Collaborator Loading…
1 of 7 tasks
@atravitz
6
ci: run slow tests separately
#1827 opened Feb 4, 2026 by atravitz Contributor • Draft
7 tasks
3
add optional deps handling and testing
#1826 opened Feb 4, 2026 by atravitz Contributor • Draft
7 tasks
2
[WIP] address warnings in test suite
#1816 opened Jan 29, 2026 by atravitz Contributor • Draft
7 tasks
2
[WIP] CLI: refactor to use QuickrunResult dataclass
#1789 opened Jan 14, 2026 by atravitz Contributor • Draft
7 tasks
@atravitz
2
[WIP] Net charge support in ABFEs
#1614 opened Oct 23, 2025 by IAlibay Member Loading…
2 tasks
1
8
move network plotting to konnektor priority:medium
#1522 opened Sep 18, 2025 by atravitz Contributor • Draft
1 of 2 tasks
1.13.0
@atravitz
3
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