Update README.md

add Rd documentation changes

fix current imports to allow for S4 packages to exceed 500 mb

Merge pull request #1499 from GreenleafLab/release_1.0.2

Release 1.0.2

Release 1.0.1 (#542)

* bugfix remove sys.time for weird error in R 4.0

* bug fix new uwot save and loading features

* deprecated

* version number

* handle error where spurious fragments seem to be 1 tile above max

* update bugfixes

* let quantCut in plotTrajectory be null

* grepExclude in plotTrajectoryHeatmap

* bugfix integrative analysis coaccessibility and peak2genelinks

* change file locking location groupcoverages

* throw error if no peakset for adding annotations

* make it so predictionScore is not needed for peak2gene links

* update addPeakSet

* updated description

* bugfix named list

* update error handling plotEnrichHeatmap

* update error messages tilematrix

* handle error with bsgenomes

* width is end - start + 1

* bugfix checkCairo in iterativeLSI

* update archr verbosity and logging for markerfeatures

* bugfix + documentation

* update subsetting to metadata

* handling case n = 1 for deviations matrix

* bugfix ordering of scTrack

* handle error where no barcodes passing on a small chromosome/scaffold

* bugfix validBSgenome

* fix missing paren

* fix missing paren

* add feature for supplying custom gene list for rna integration

* add sanity check to partial matrix

* update cellsInArrow in case user overrides sample in ArchRProj

* Add null option for genesUse to validInput

* bugfix NA in combined vars

* add checks for genes symbol to be not a list

Co-authored-by: Ryan Corces <ryancorces@gmail.com>

bugfix

Update README.md