GitHub - GfellerLab/MetacellAnalysisTutorial: Tutorial on construction and analysis of metacells

This repository serves as the source code for the Metacell Analysis Tutorial.

This tutorial is a part of our study on the use of the metacell concept in single-cell genomics.

Name	Name	Last commit message	Last commit date
Latest commit History 136 Commits 136 Commits
R	R
_bookdown_files	_bookdown_files
docs	docs
functional_chunks	functional_chunks
images	images
sub_pages	sub_pages
01-Requirements.Rmd	01-Requirements.Rmd
10-intro.Rmd	10-intro.Rmd
21-MC_construction_discrete.Rmd	21-MC_construction_discrete.Rmd
22-Metacells_QCs.Rmd	22-Metacells_QCs.Rmd
30-MC_analysis_discrete.Rmd	30-MC_analysis_discrete.Rmd
31-downstream_continuous.Rmd	31-downstream_continuous.Rmd
40-integration_analysis.Rmd	40-integration_analysis.Rmd
50-references.Rmd	50-references.Rmd
Metacell_tutorial.Rproj	Metacell_tutorial.Rproj
README.md	README.md
SEACells_requirements.txt	SEACells_requirements.txt
_bookdown.yml	_bookdown.yml
_output.yml	_output.yml
biochemistry-and-cell-biology.csl	biochemistry-and-cell-biology.csl
chicago-fullnote-bibliography.csl	chicago-fullnote-bibliography.csl
citations.bib	citations.bib
environment_MetacellTutorial.yml	environment_MetacellTutorial.yml
index.Rmd	index.Rmd
packages.bib	packages.bib
preamble.tex	preamble.tex
style.css	style.css

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