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1. PopLDdecay PopLDdecay Public

   PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files

   C++ 209 53

2. LDBlockShow LDBlockShow Public

   LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files

   Perl 223 44

3. RectChr RectChr Public

   Multi-level visualization of genomic statistical variables on rectangular chromosomes

   Perl 113 14

4. Reseqtools Reseqtools Public

   A Toolkit for analyzing next-generation DNA Re-Sequencing data

   85 28

5. VCF2Dis VCF2Dis Public

   VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Format

   C++ 108 21

6. BamDeal BamDeal Public

   BamDeal: a comprehensive toolkit for bam manipulation

   C++ 55 19