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1000genomes: choosing the best annotation from multiple transcripts
genome snp written 23 hours ago by spiral0160 • updated 21 hours ago by Sergey Naumenko140
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Variant calling and downstream analysis
next-gen snp written 1 day ago by arash.iranzadeh19800 • updated 1 day ago by Brian Bushnell12k
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Feasible Annotation of 4 million unique SNPs
gatk ase snp written 2 days ago by serpalma.v10 • updated 1 day ago by Emily_Ensembl11k
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Question about run cnvkit on DNAnexus
cnvkit snp dnanexus written 5 weeks ago by qyang20 • updated 1 day ago by Eric T.1.7k
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SNPs Calling Tools
variant calling alignment snp rna-seq written 4 months ago by dd.catania0 • updated 2 days ago by colindaven220
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About the reads aligned 0 times (around 10%) in Bowtie2.
chip-seq snp written 2 days ago by ghostforever.shi10 • updated 2 days ago by Philipp Bayer4.5k
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SNP array liftover data with p values
p value snp liftover written 19 months ago by nuketbilgen30 • updated 2 days ago by Biostar ♦♦ 20
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Group mutations in SNP data
genome snp written 4 days ago by fugu30
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87
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Retrieving identical positions from mpileup file
alignment tutorials snp written 3 days ago by samocarp0 • updated 3 days ago by Samuel Brady100
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How to find strain specific truncated genes?
genome gene next-gen snp alignment written 21 months ago by mmart1220 • updated 4 days ago by Biostar ♦♦ 20
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No T base in the Illumina report file
array illumina snp written 5 days ago by nehal1610.ranabhatt0 • updated 5 days ago by Istvan Albert ♦♦ 72k
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Exclude reads soft-clipped > N bases in Freebayes
next-gen snp written 5 days ago by fugu30 • updated 5 days ago by Istvan Albert ♦♦ 72k
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How to filter mutect2 VCF output?
gatk alignment snp mutect2 written 15 days ago by Whoknows570 • updated 5 days ago by poisonAlien2.3k
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snpEff genome database build problem: no snpEffectorPredit
snp written 9 days ago by HannahT0 • updated 9 days ago by Pierre Lindenbaum95k
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