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Q6NZB4 (Q6NZB4_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified October 3, 2012. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Transporter RuleBase RU003732
Gene names
Name:Slc6a2 MGI 1270850
OrganismMus musculus (Mouse) EMBL AAH66216.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length617 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the sodium:neurotransmitter symporter (SNF) family. RuleBase RU003732

Ontologies

Keywords
   Biological processSymport RuleBase RU003732 SAAS SAAS000175
Transport
   Cellular componentMembrane
   DomainTransmembrane
Transmembrane helix SAAS SAAS000175
Gene Ontology (GO)
   Cellular componentintegral to plasma membrane

Inferred from electronic annotation. Source: InterPro

   Molecular functionneurotransmitter:sodium symporter activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q6NZB4 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: F145BFF90FB4F7B4

FASTA61769,182
        10         20         30         40         50         60 
MLLARMNPQV QPELGGADPL PEQPLRPCKT ADLLVAKERN GVQCLLASQD SDAQPRETWG 

        70         80         90        100        110        120 
KKIDFLLSVV GFAVDLANVW RFPYLCYKNG GGAFLIPYTL FLIIAGMPLF YMELALGQYN 

       130        140        150        160        170        180 
REGAATVWKI CPFFKGVGYA VILIALYVGF YYNAIIAWSL YYLFASFTLN LPWTNCGHSW 

       190        200        210        220        230        240 
NSPNCTDPKL LNASVLGDHT KYSKYKFTPA AEFYERGVLH LHESSGIHDI GLPQWQLLLC 

       250        260        270        280        290        300 
LMVVIVVLYF SLWKGVKTSG KVVWITATLP YFVLFVLLVH GVTLPGASNG INAYLHIDFY 

       310        320        330        340        350        360 
RLKEATVWID AATQIFFSLG AGFGVLIAFA SYNKFDNNCY RDALLTSTIN CVTSFISGFA 

       370        380        390        400        410        420 
IFSILGYMAH EHKVNIEDVA TEGAGLVFIL YPEAISTLSG STFWAVLFFL MLLALGLDSS 

       430        440        450        460        470        480 
MGGMEAVITG LADDFQVLKR HRKLFTCVVT ISTFLLALFC ITKGGIYVLT LLDTFAAGTS 

       490        500        510        520        530        540 
ILFAVLMEAI GVSWFYGVDR FSNNIQQMMG FKPGLYWRLC WKFVSPAFLL FVVVVSIINF 

       550        560        570        580        590        600 
KPLTYDDYTY PPWANWVGWG IALSSMILVP AYVIYKFPSI RGSLWERVAY GITPENEHHL 

       610 
VAQRDVRQFQ LRHWLAI

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6J EMBL AAH66216.1.
Tissue: Embryo EMBL AAH66216.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC066216 mRNA. Translation: AAH66216.1.
IPIIPI00116056.
UniGeneMm.57040.

3D structure databases

ProteinModelPortalQ6NZB4.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ6NZB4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOVERGENHBG071421.
InParanoidQ6NZB4.

Gene expression databases

ArrayExpressQ6NZB4.
GenevestigatorQ6NZB4.

Family and domain databases

InterProIPR000175. Na/ntran_symport.
IPR002435. Na/ntran_symport_noradrenaline.
[Graphical view]
PANTHERPTHR11616. PTHR11616. 1 hit.
PfamPF00209. SNF. 1 hit.
[Graphical view]
PRINTSPR00176. NANEUSMPORT.
PR01201. NORTRANSPORT.
PROSITEPS00610. NA_NEUROTRAN_SYMP_1. 1 hit.
PS00754. NA_NEUROTRAN_SYMP_2. 1 hit.
PS50267. NA_NEUROTRAN_SYMP_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6NZB4_MOUSE
AccessionPrimary (citable) accession number: Q6NZB4
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: October 3, 2012
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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