Getting help

• README: general documentation
• Manpage: explanation of command-line options
• Peer-reviewed paper: algorithms and evaluations (please cite if you use minimap2)
• Preprint: similar to the paper but free of charge
• GitHub Issues page: report bugs, request features and ask questions

Acquiring minimap2

• git clone https://github.com/lh3/minimap2.git
• GitHub Release page: versioned packages and precompiled binaries
• Also available from BioConda
• Python binding via PyPI or via BioConda