shrimPy: Smart High-throughput Robust Imaging & Measurement in Python
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Updated
Sep 29, 2025 - Python
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high-throughput-imaging
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An image analysis macros pipeline developed for Fiji to quantify cell counts and fluorescence intensity (FI) per cell from microscopy images. Fluorescence intensity is measured only in regions containing a single nucleus, ensuring that each measurement corresponds to an individual cell.
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Updated
Oct 9, 2025 - ImageJ Macro
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