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Commit 5b4d197

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hanneshapkercrowe-googlecasassgdeutraniumBioGeek
authored
Move MCT component to TFX Addons (#196)
* initial move of the existing mct code * Added missing file * Added (unreviewed) MCT example * updated example * extended doc * add census helper files * Create 20220513-PandasTransform.md First draft of project proposal. * Update 20220513-PandasTransform.md Oops, forgot to add the dependencies! * Update 20220513-PandasTransform.md Adding a note about statistics and schema for the changed dataset. * Rcrowe fixing filename (#140) * Create 20220513-pandas_transform.md * Delete 20220513-PandasTransform.md * Update README.md (#142) Fixing broken links on PyPI page. * fix bad link in xgboost_evaluator * Update CODEOWNERS * Cherry pick bot to backport changes (#144) * Cherry pick bot to backport changes * Update RELEASE.md * validate user is release manager * Update examples for feature selection component (#116) * Updated module file for compatibility * Updated module file for compatibility * Update iris_module_file.py * Created Palmer Penguins example using Colaboratory * Created Pima Indians Diabetes example pipeline using Colaboratory * Created Iris example pipeline using Colaboratory * Deleted outdated file + replaced with new examples * Deleted outdated file * Fix bad link in xgboost_evaluator (#145) Commit 93fd006 didn't correctly fix the link. * Increase supported version from TFX <1.8 to <1.9 (#147) * include TFX 1.8 * increase CI * switch cache key to constaint first * remove shared cache * fix exit handler * fix patch issues * reformating yapf * Use feast from master git to avoid pip infinite backtrack (#152) * pin pip * Update ci.yml * use requirements max and min instead * add missing letter * fix using -r option * ammend triggers * add tensorflow to the mix * tf 2.6 * move constraints to version file * pin api-core * add protobuf * protobuf 3.19 * add mlp-sdk * add extras for api-core * add it to requirements instead * move feast dep * use feast repo instead of release * remove mlpipeline-sdk * Updated readme with module file guidelines and example (#151) * bump feast version support (#154) * Add feature_selection to included pkg (#161) * add feature_selection to included pkg * upgrade tfx to avoid beam issue in sklearn example * fix due to upgrade of tfma * fix missing 1 types * format inline * update extractor test * remove the header generator * break down CI by component * use file.json * use python file * use correct base_dir * touch for feast_examplegen * ensure it works fine * run if certain dangerous files change * removed non used files and update CONTRIBUTING * improve a bit how variable is set * revert change in feastexamplegen * remove non used variable in version.py * rename job phase * cancel if new ones * add some extra space * add note on inspiration * PandasTransform - Ready for review (#155) * Initial commit * Fixing lint * More lint * Yet more lint * Oops, whitespace * Unused imports * More cleanup * Misc cleanup * Fixed a couple of things * Fixing astype * Disabling unnecessary-comprehension * Oops, wrong comprehension * Trying to improve version handling * Order of imports * Removing reimport * Adding version check to tests * Missed the beam pipeline on the min * Indents on the test params * Lint wants the else formatted differently * Adding an example and update to pydoc for component * Adding README and release notes * Added beam_pipeline_args, updated README * Trying to fix lint * Adding dependencies * Lint, maybe yapf fixes * Trying to fix formatting * Capping Pandas version, updating CODEOWNERS * Various updates pre-merge * support tfx 1.9 (#162) * small fix for filter projects (#164) * small fix for filter projects * Update ci.yml * Update README to add missing component (#165) * Update README.md * fix pandas_transform * Added release notes for feature selection component (#150) * Update CONTRIBUTING.md * Create README.md Adding a readme to the example * Create requirements.txt Adding requirements.txt to the example. Only referencing the component, since that will keep all other dependencies in one place. * Added tests for feature selection component (#149) * Initial commit with working tests * cleaned and ensured the file is working with pre-commit * Testing checkpoint * Added support for module_file * Improved documentation * Fixed test * Fixed pre-commit errors * Added data files for component_test.py * Added tests for artifact count by type * Fixed minor bug * Added test to check if correct features are being selected * Update dependencies for feature_selection * Update tfx_addons/version.py * Update tfx_addons/version.py * Update tfx_addons/version.py Co-authored-by: Gerard Casas Saez <gcasassaez@twitter.com> * Improve examples CI to automatically pick up projects (#166) * make ci_examples run only when needed * remove non used init file * only run those examples that have test files * address comments and improve documentation * add concurrency for ci-examples * CI: Run all if event name is push (#167) * if event name is push run all projects * remove non-used RUN_ALL_FILE * run ci-examples if changes in filter_examples * add comment on why env name * add better logging * Move main to 0.4 after 0.3 release * Update RELEASE.md (#170) * update firebase publisher proposal (#171) * update firebase publisher proposal update firebase publisher proposal with more detailed descriptions * remove vague word temporary * replace custom_config with concrete parameters * Update tfx_addons/firebase_publisher/README.md Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> * clarify usage of SavedModel Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> * HFModelPusher component proposal (#174) * write HFModelPusher component proposal * Update proposals/20220823-huggingface_model_pusher.md Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> * Update proposals/20220823-huggingface_model_pusher.md Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> * Update proposals/20220823-huggingface_model_pusher.md Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> * Update proposals/20220823-huggingface_model_pusher.md Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> * Update proposals/20220823-huggingface_model_pusher.md Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> * Update proposals/20220823-huggingface_model_pusher.md Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> * Update proposals/20220823-huggingface_model_pusher.md Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> * commit_id in the outputs, more desc on the branching Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> * fix: missing option --hook-type (#177) fix: missing option `--hook-type` in "Install pre-commit hooks for push hooks: `pre-commit install --hook-type pre-push`" * Scaling Sampler by using row level probability (#163) * initial probabilistic sampling * using sampled in batches * use toDict * use calculation for sampling by class * implement using sampling at individual level * fixup readme * improve executor docs * use patch to avoid flaky tests * Add FirebasePublisher Implementation (#175) * add empty __init__.py * add component.py * add component spec * add executor.py * unncessary codes from custom_config * initial implementation done * fix typo * re-organize the runner * pre-commit * pre-commit * add docstring for the component * add basic unit tests * add basic unit tests * change private to public * change function call name * pass pre-commit * Update tfx_addons/firebase_publisher/runner.py Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> * Update tfx_addons/firebase_publisher/component.py Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> * Update tfx_addons/firebase_publisher/component.py Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> * Update tfx_addons/firebase_publisher/executor.py Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> * Update tfx_addons/firebase_publisher/runner.py Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> * Update tfx_addons/firebase_publisher/runner.py Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> * Update tfx_addons/firebase_publisher/runner.py Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> * remove mis-placed docstring in the component * fix full-step consistency * rename model_exist -> is_model_present * rename upload_model -> upload_model_to_gcs * more descriptions on update_model * update log message on model_create * fix case inconsistency * fix pre-commit * add copyright * add import module in __init__.py * add firebase_publisher version info * fix typo * remove ValueError in docstring * update docstring * fix: pre-commit * fix: pre-commit * update function name in the test module * add copyrights * reduce version requirement * remove version info in __init__.py * add constraint for firebase in CI Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> Co-authored-by: Gerard Casas Saez <gcasassaez@twitter.com> * update HFModelPusher proposal * add space_url in the output * Update proposals/20220823-huggingface_model_pusher.md Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> * Update proposals/20220823-huggingface_model_pusher.md Co-authored-by: Sayak Paul <spsayakpaul@gmail.com> * Archive penguins_sklearn example (#184) * Update README.md Archived and pointed to example in main TFX repo. * Update penguin_pipeline_sklearn_gcp.py Commenting out to avoid issues while archived. * Update penguin_pipeline_sklearn_gcp_test.py Commenting out to avoid CI issues while archived. * Update penguin_pipeline_sklearn_local.py Commenting out to avoid CI issues while archived. * Update penguin_pipeline_sklearn_local_e2e_test.py Commenting out to avoid CI issues while archived. * Update penguin_pipeline_sklearn_local.py * Update penguin_utils_sklearn.py Commented out to avoid CI issues while archived * Update sklearn_predict_extractor.py Commented out to avoid CI issues while archived. * Update sklearn_predict_extractor_test.py Commented out to avoid CI issues while archived. * Update requirements.txt Commenting out to avoid CI issues while archived * Update Dockerfile Commenting out to avoid CI issues while archived * Update penguin_utils_sklearn.py Lint * Update sklearn_predict_extractor.py Lint * Update sklearn_predict_extractor.py Lint * Update penguin_pipeline_sklearn_gcp.py Lint * Update penguin_pipeline_sklearn_gcp_test.py Lint * Update penguin_pipeline_sklearn_local.py Lint * Update penguin_pipeline_sklearn_local_e2e_test.py Lint * Update penguin_utils_sklearn.py Lint * Update sklearn_predict_extractor_test.py Lint * Update sklearn_predict_extractor_test.py Lint * Update penguin_utils_sklearn.py Lint * Update sklearn_predict_extractor.py Lint * Update sklearn_predict_extractor_test.py Lint * Update penguin_pipeline_sklearn_gcp_test.py * Update penguin_pipeline_sklearn_local_e2e_test.py Null test to satisfy CI * Update sklearn_predict_extractor_test.py Null test to satisfy CI * Update penguin_pipeline_sklearn_gcp_test.py Lint * Update penguin_pipeline_sklearn_local_e2e_test.py Lint * Update sklearn_predict_extractor_test.py Lint * Update penguin_pipeline_sklearn_local_e2e_test.py Lint * Update penguin_pipeline_sklearn_gcp_test.py Lint * Update penguin_pipeline_sklearn_gcp_test.py Lint * Update penguin_pipeline_sklearn_local_e2e_test.py Lint * Update sklearn_predict_extractor_test.py Lint * remove files and include reference to existing code Co-authored-by: Gerard Casas Saez <gcasassaez@twitter.com> * remove old data (#185) * PyTorch TFX proposal * clean up of CODEOWNERS (#188) * Support TFX 1.10 (#187) * Initial release candidate testing for tfx==1.10.0rc0 * remove suffux from test_utils * add missing extra line * use tfx 1.10 constraint * add firebase_publisher to readme * Add HF pusher owners (#192) * Add HuggingFace Pusher Implementation (#191) * add hfpusher implementation * update version.py * add test for runner.py * linting * add dependency * add pytest ignore protected access * add one more test * fix: test failure * copy proposa as README * add git-lfs dependency * document about RuntimeError when git-lfs is not installed * add _is_git_lfs_installed * add test cases for executor * change _executor -> exe * yapf * Update tfx_addons/huggingface_pusher/README.md Co-authored-by: Gerard Casas Saez <gcasassaez@twitter.com> * Update tfx_addons/huggingface_pusher/executor_test.py Co-authored-by: Gerard Casas Saez <gcasassaez@twitter.com> * add huggingface document reference for git-lfs * space_config example added to component_test * yapf * add optional decrypt features * add decrypt_fn in README Co-authored-by: Gerard Casas Saez <gcasassaez@twitter.com> * initial move of the existing mct code * Added missing file * Added (unreviewed) MCT example * updated example * extended doc * add census helper files * updated mct version dependency * yapf + isort updates * updated gitignore to ignore notebook generated files * isort updated * removed notebook example generated files * removed model_card_pb2.SensitiveData() and model_card_pb2.ConfidenceInterval() * updated formatting * updated example notebook * updated example notebook for the MCT component * updated example notebook for the MCT component * set the code owners for the MCT component * Update RELEASE.md * Update RELEASE.md * added tfxtest * added tfxtest * updated .gitignore * fix typo in CODEOWNERS * Update .gitignore --------- Co-authored-by: Robert Crowe <robertcrowe@google.com> Co-authored-by: Gerard Casas Saez <gcasassaez@twitter.com> Co-authored-by: Kshitijaa Jaglan <29124655+deutranium@users.noreply.github.com> Co-authored-by: Jeroen Van Goey <jeroen.vangoey@gmail.com> Co-authored-by: Chansung Park <deep.diver.csp@gmail.com> Co-authored-by: Sayak Paul <spsayakpaul@gmail.com>
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# PandasTransform Component
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/tfx_addons/pandas_transform @rcrowe-google
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# PandasTransform Component
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/tfx_addons/model_card_generator @codesue @hanneshapke
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/examples/model_card_generator @codesue @hanneshapke
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# Apache Airflow Orchestrator
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# unnecessary project files
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census_income_constants.py
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census_income_trainer.py
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census_income_transform.py

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