I'm a bioinformatician working on microbial (meta)genomics :DNA:
🤖 I like tinkering with nextflow:
📦 Some tools are available via Bioconda :
| 🧬 🚀 seqfu | ⛰️ bamtocov | 🖌️ dadaist2 | 🛠️ qax |
|---|---|---|---|
| to extract coverage tracks from BAM files | to analyze 16s/ITS from reads to R | utilities for Qiime2 artifacts |
📖 I use GitHub also for training material
| 📓 microbiome bioinformatics | 🧔 Personal website | 💻 bash training | 🎥 Companion videos |
|---|---|---|---|
| Some tutorials | A small blog | Toy files to practice Bash | A Youtube channel |
I'm using Mastodon