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Commit bd893cb

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MatthewSZhangMatthewSZhang
committed
MNT black to ruff
1 parent a88a460 commit bd893cb
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20 files changed

+408
-409
lines changed

‎.github/workflows/ci.yml

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+21-1Lines changed: 21 additions & 1 deletion
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@@ -11,8 +11,28 @@ jobs:
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call-test:
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uses: ./.github/workflows/test.yml
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secrets: inherit
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build-sdist:
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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v4
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- uses: prefix-dev/setup-pixi@v0.8.8
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with:
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environments: dev
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cache: true
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- name: Re-install local
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run: |
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pixi reinstall -e dev --frozen fastcan
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- name: Build SDist
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run: |
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pixi run build-sdist
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- name: Store artifacts
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uses: actions/upload-artifact@v4
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with:
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name: cibw-sdist
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path: dist/*.tar.gz
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build:
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build-wheels:
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strategy:
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fail-fast: false
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matrix:

‎.github/workflows/lint.yml

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This file was deleted.

‎.github/workflows/static.yml

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name: Static
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on:
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workflow_call:
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jobs:
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static:
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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v4
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- uses: prefix-dev/setup-pixi@v0.8.8
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with:
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environments: static
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cache: true
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- name: Re-install local
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run: |
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pixi reinstall -e static --frozen fastcan
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- name: Linter
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run: |
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pixi run lint
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- name: Lint Cython
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run: |
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pixi run cython-lint
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- name: Formatter
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run: |
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pixi run fmt
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- name: Type check
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run: |
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pixi run type

‎.github/workflows/test.yml

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@@ -9,8 +9,7 @@ on:
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jobs:
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call-lint:
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uses: ./.github/workflows/lint.yml
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secrets: inherit
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uses: ./.github/workflows/static.yml
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test:
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strategy:
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- uses: actions/checkout@v4
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- uses: prefix-dev/setup-pixi@v0.8.8
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with:
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environments: default
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environments: dev
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cache: true
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- name: Re-install local
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- name: Test nogil
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run: |
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pixi run nogil-eta
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- name: Test coverage
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if: runner.os == 'Linux'
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shell: bash
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run: |
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FMT=xml pixi run test-coverage
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- name: Upload coverage reports to Codecov
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if: runner.os == 'Linux'
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uses: codecov/codecov-action@v5
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with:
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token: ${{ secrets.CODECOV_TOKEN }}

‎examples/plot_narx_msa.py

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+1-1Lines changed: 1 addition & 1 deletion
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@@ -93,7 +93,7 @@ def auto_duffing_equation(y, t):
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sol = odeint(duffing_equation, [0.6, -0.8], t)
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u_test = 2.5 * np.cos(2 * np.pi * t).reshape(-1, 1)
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y_test = sol[:, 0]+ e_test
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y_test = sol[:, 0] + e_test
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# %%
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# One-step-head VS. multi-step-ahead NARX

‎examples/plot_speed.py

Copy file name to clipboardExpand all lines: examples/plot_speed.py
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@@ -178,12 +178,12 @@ def baseline(X, y, t):
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time_eta = np.zeros(n_features_max, dtype=float)
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for i in range(n_features_max):
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time_h[i] = timeit(
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f"s = FastCan({i+1}, verbose=0).fit(X, y)",
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f"s = FastCan({i + 1}, verbose=0).fit(X, y)",
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number=10,
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globals=globals(),
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)
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time_eta[i] = timeit(
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f"s = FastCan({i+1}, eta=True, verbose=0).fit(X, y)",
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f"s = FastCan({i + 1}, eta=True, verbose=0).fit(X, y)",
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number=10,
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globals=globals(),
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)

‎fastcan/__init__.py

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__all__ = [
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"FastCan",
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"refine",
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"minibatch",
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"narx",
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"refine",
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"utils",
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]

‎fastcan/_fastcan.py

Copy file name to clipboardExpand all lines: fastcan/_fastcan.py
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from sklearn.utils._param_validation import Interval
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from sklearn.utils.validation import check_is_fitted, validate_data
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from ._cancorr_fast import _forward_search # type: ignore
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from ._cancorr_fast import _forward_search # type: ignore[attr-defined]
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class FastCan(SelectorMixin, BaseEstimator):

‎fastcan/_minibatch.py

Copy file name to clipboardExpand all lines: fastcan/_minibatch.py
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from sklearn.utils._param_validation import Interval, validate_params
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from sklearn.utils.validation import check_X_y
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from ._cancorr_fast import _forward_search # type: ignore
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from ._cancorr_fast import _forward_search # type: ignore[attr-defined]
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from ._fastcan import _prepare_search
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‎fastcan/_refine.py

Copy file name to clipboardExpand all lines: fastcan/_refine.py
+1-1Lines changed: 1 addition & 1 deletion
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from sklearn.utils._param_validation import Interval, StrOptions, validate_params
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from sklearn.utils.validation import check_is_fitted
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from ._cancorr_fast import _forward_search # type: ignore
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from ._cancorr_fast import _forward_search # type: ignore[attr-defined]
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from ._fastcan import FastCan, _prepare_search
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‎fastcan/narx.py

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+5-1Lines changed: 5 additions & 1 deletion
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)
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from ._fastcan import FastCan
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from ._narx_fast import _predict_step, _update_cfd, _update_terms # type: ignore
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from ._narx_fast import ( # type: ignore[attr-defined]
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_predict_step,
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_update_cfd,
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_update_terms,
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)
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from ._refine import refine
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from .utils import mask_missing_values
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