neherlab
- 82 followers
- Basel, Switzerland
- https://neherlab.org
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covid19_scenarios
covid19_scenarios PublicModels of COVID-19 outbreak trajectories and hospital demand
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pan-genome-analysis
pan-genome-analysis PublicProcessing pipeline for pan-genome visulization and exploration
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SARS-CoV-2_variant-reports
SARS-CoV-2_variant-reports PublicInformal summaries of notable SARS-CoV-2 lineages
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pan-genome-visualization
pan-genome-visualization PublicForked from wdingx/pan-genome-visualization
Visualization of the pan-genome output by panX
Repositories
- nextclade_data_workflows Public
neherlab/nextclade_data_workflows’s past year of commit activity - treetime Public
Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction
neherlab/treetime’s past year of commit activity - mut-fitness-general Public Forked from neherlab/SARS2-mut-fitness-v2
Repository for computing fitness effects of nucletoide and amino acid mutations based on accurate neutral rates.
neherlab/mut-fitness-general’s past year of commit activity - ffpopsim Public
FFPopSim is a collection of C++ classes and a Python interface for efficient simulation of large populations, in particular when the product of mutation rate and population size is larger than one. It consists of one library for individual-based simulations, and a complementary one for simulation of the entire genotype distribution. The latter i…
neherlab/ffpopsim’s past year of commit activity - rsv_epidemiology_2025 Public
A collection of code and data used for "Molecular Epidemiology of Respiratory Syncytial Virus in Switzerland from 2020 to 2024" publication.
neherlab/rsv_epidemiology_2025’s past year of commit activity
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