Issues
is:issue state:open
is:issue state:open
Search results
- Status: Open.#557 In nanoporetech/modkit;
<code>modkit pileup</code> --bgzf but output not compressed
bugSomething isn't workingSomething isn't workingStatus: Open.#556 In nanoporetech/modkit;modkit dmr pair fails with Error: “valid coverage is not equal to the sum of canonical and modified counts”
bugSomething isn't workingSomething isn't workingtroubleshootingworkflow and data preparation questionsworkflow and data preparation questionsStatus: Open.#554 In nanoporetech/modkit;Help understanding motif search with --known-motif
bugSomething isn't workingSomething isn't workingquestionLooking for clarification on inputs and/or outputsLooking for clarification on inputs and/or outputsStatus: Open.#553 In nanoporetech/modkit;Motif specific, polyploid DMR analysis?
questionLooking for clarification on inputs and/or outputsLooking for clarification on inputs and/or outputsStatus: Open.#551 In nanoporetech/modkit;Discrepancy between threshold estimated by modkit summary and modkit pileup and modkit sample-probs
enhancementNew feature or requestNew feature or requestquestionLooking for clarification on inputs and/or outputsLooking for clarification on inputs and/or outputsStatus: Open.#550 In nanoporetech/modkit;Discrepancy between threshold estimated by modkit summary and modkit pileup
troubleshootingworkflow and data preparation questionsworkflow and data preparation questionsStatus: Open.#548 In nanoporetech/modkit;Modkit pileup (v. 0.6.0) - modification percentage over 100%
bugSomething isn't workingSomething isn't workingbuild-availablecustom build produced for fix.custom build produced for fix.Status: Open.#547 In nanoporetech/modkit;MAP QUALITY Filter Request
enhancementNew feature or requestNew feature or requestquestionLooking for clarification on inputs and/or outputsLooking for clarification on inputs and/or outputsStatus: Open.#546 In nanoporetech/modkit;Feature request: downsampling to X reads
questionLooking for clarification on inputs and/or outputsLooking for clarification on inputs and/or outputsStatus: Open.#542 In nanoporetech/modkit;smoothing
questionLooking for clarification on inputs and/or outputsLooking for clarification on inputs and/or outputstroubleshootingworkflow and data preparation questionsworkflow and data preparation questionsStatus: Open.#541 In nanoporetech/modkit;Modkit motif search
questionLooking for clarification on inputs and/or outputsLooking for clarification on inputs and/or outputsStatus: Open.#540 In nanoporetech/modkit;