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mdahwireng/Modeling-Water-Flow-Using-A-Custom-Built-Python-Module

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Modeling Water Flow Using Lidar Data And A Custom Built Python Module

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Introduction

This project seeks to model the relief of a farm owned by AgriTech in Iowa, USA, using publicly available data from USGS 3DEP project. This project is also a case study which leads to the creation of a python package which fetch, transform and visualize publicly available satellite and Lidar data by interacting with public APIs.

This package abstracts processes from the querying, retrieval, conversion of coordinate systems, creating Digital Elevation Models to the visualization of produced images in both 2d and 3d.

Directory Structure

Modules

Notebooks

Data

Documentation

Modules

There are 5 modules in all. They are reference, get_region module, pipeline, visualize and process_to_viz modules. This package is built on pdal, geopandas, pandas, numpy, rasterio, matplotliband shapely

reference module

This module contains a class called CreateReference. This class creates and pickle-save a geodataframe for the comparison of boundaries to check which region the boundary passed falls in.

methods Mthd desc arguments Arg type Description
init Initiatilzes class regfile_path string Path to a text file with the names of all regions with data on AWS cloud
prefix string The leading common string to all the paths leading to names of hosted data on AWS cloud
tail string The trailing common string to all the paths leading to names of hosted data on AWS cloud
get_df_dict This method creates and saves (if save=True) dictionary of region names, year, path, and bounds {'name':[], 'year':[], 'path':[], 'bounds':[]} save_path string path to save genrated dictionary
save bolean true to save the dictionary false, not to.
get_gdf This method creates and saves a geodataframe of all regions and their boundaries path_to_save string path to save generated geodataframe
run_all This method runs all the methods in this class and saves the geodataframe and reference dictionary dict_save_path string path to save generated dataframe

get_region module

This module contains a class called class RetrieveRegion. This class takes bounds and crs from users and returns a region the bounds given by user falls in.

methods Mthd desc arguments Arg type Description
init This takes a list containing a list of bounds [minx, miny, maxx, maxy] and a string for the crs ESGP:xxxxxx''' bnds list Boundaries for region of interest
crs string EPSG code for coordinate reference system of bnds
get_region This method checks for regions in which the bounds fall in No arguments - -

pipeline module

This module contains a function called get_raster_terrain. This function queries, retrieve and pre-process point cloud data using a pipeline parsed to it

function func desc arguments Arg type Description
get_raster_terrain This function queries, retrieve and pre-process point cloud data using a pipeline parsed to it file_path string Path to use to access file with data on cloud
bounds string Sting of boundaries in the format ‘([minx, maxx],[miny,maxy]]}’
csv_path string Path to save the output of the pre-processing in a csv file
tiff_path string Path to save the output of the generated DEM from pre-processing
pipeline_path string Path to structured pdal pipe line in json format

visualize module

This module contains plot_raster_, viz_contour and viz_3d functions

function func desc arguments Arg type Description
viz_contour This function plots a contour of DEM tif_path string Path to image to be visualised
img_path string Path to save generated image
title string Title to be displayed on plot
notebook Boolean True to indicate the function is being run in a notebook, false for otherwise
viz_3d This fuction plots a 3d plots from x,y and z values from a parsed csv file csv_path sring Path to csv file with data from preprocessing
title string Title to be displayed on plot
img_save_path string Path to save generated image
skip_val int Factor to reduce the number of samples to be plotted
notebook Boolean True to indicate the function is being run in a notebook, false for otherwise
plot_raster_
Plots raster tif image both in log scale(+1) and original verion tifile string Path to image to be visualised
img_save_path string Path to save generated image
title string Title to be displayed on plot
notebook Boolean True to indicate the function is being run in a notebook, false for otherwise

Process_to_viz module

This module contains a class called class ProcessToViz. This class encapsulate all the process from retrieval of data to visualization

methods Mthd desc arguments Arg type Description
init Initiatilzes class bnds list Boundaries for region of interest
crs string EPSG code for coordinate reference system of bnds
csv_path string Path to save the output of the pre-processing in a csv file
tiff_path string Path to save the output of the generated DEM from pre-processing
pipeline_path string Path to structured pdal pipeline in json format
ret_reg Retrieves Region information from reference data No arguments - -
ret_data Retrieves and pre-process cloud data No arguments - -
viz This visualizes the produced tif from ret_data contour_save_path string Path to save generated contour visualization image
viz_3d_save_path string Path to save 3d visualized DEM image
raster_save_path string Path to save generated raster colour image
run_to_viz This runs all processes including visualization contour_save_path string Path to save generated contour visualization image
viz_3d_save_path string Path to save 3d visualized DEM image
raster_save_path string Path to save generated raster colour image

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