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Question about augmentation

Status: Open.

#133 In lh3/minigraph;

· panosioannidis opened on Nov 22, 2025

Annouce HPRC #2 minigraph indices on Zenodo via social media

Status: Open.

#131 In lh3/minigraph;

· jelber2 opened on Oct 22, 2025

Storing minigraph index for multiple queries

Status: Open.

#128 In lh3/minigraph;

· vikshiv opened on Jul 9, 2025

Question about GFA format, unexpected link information.

Status: Open.

#126 In lh3/minigraph;

· AltriaXY opened on Apr 15, 2025

Cannot add apparent simple SV on pangenome

Status: Open.

#124 In lh3/minigraph;

· LzzCongee opened on Feb 21, 2025

The unitig graph output by hifiasm is not compatible

Status: Open.

#123 In lh3/minigraph;

· zxzhang8 opened on Feb 14, 2025

How to add short sequenced data to our pan-genome

Status: Open.

#121 In lh3/minigraph;

· Yonosukee opened on Dec 30, 2024

Some questions about SV calling

Status: Open.

#120 In lh3/minigraph;

· HuangYihang1222 opened on Dec 13, 2024

Minigraph does not find variants in simulated data

Status: Open.

#119 In lh3/minigraph;

· agolicz opened on Nov 29, 2024

Simulating with a small sample

Status: Open.

#118 In lh3/minigraph;

· jp-jong opened on Nov 27, 2024

Low accuracy on simulated reads and overlapping primary alignments

questionFurther information is requestedFurther information is requested

Status: Open.

#115 In lh3/minigraph;

· xchang1 opened on Oct 14, 2024

Add SN tag (or equivalent) for L lines

Status: Open.

#114 In lh3/minigraph;

· hugocarmaga opened on Oct 8, 2024