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setup.py

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from setuptools import setup, find_packages

from pathlib import Path

install_requires = [

"numpy",

"fastplotlib[notebook,tests,docs]",

"ipydatagrid",

"pandas>=1.5.0",

"decord",

"ipywidgets==8.0",

"pytest",

"glfw",

"tqdm",

"requests",

"tables",

"jupyter-rfb",

"jupyterlab<4",

"kornia",

"omegaconf", # needed because of how models are loaded from checkpoint

"jupyterlab-widgets==3.0.7", # pinned bc of ipydatagrid

"nbmake",

"vidio",

"lightning",

"tensorflow",

"matplotlib",

"torchvision",

"h5py",

]

extras_require = {

"docs": [

"sphinx",

"sphinx-design",

"pydata-sphinx-theme"

],

}

with open(Path(__file__).parent.joinpath("README.md")) as f:

readme = f.read()

with open(Path(__file__).parent.joinpath("animal_soup", "VERSION"), "r") as f:

ver = f.read().split("\n")[0]

setup(

name='animal-soup',

version=ver,

long_description=readme,

long_description_content_type='text/markdown',

packages=find_packages(),

url='https://github.com/hantman-lab/animal-soup',

license='GPL-3.0 license',

author='clewis7',

author_email='',

python_requires='>=3.8',

install_requires=install_requires,

extras_require=extras_require,

include_package_data=True,

description='Hantman lab automated behavioral classification tool'

)