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Commit ec5772d

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lafitalafita
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Parse the release date from MMCIF files
1 parent a145f9c commit ec5772d
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‎biojava-integrationtest/src/test/java/org/biojava/nbio/structure/test/PDBFileParserTest.java‎

Copy file name to clipboardExpand all lines: biojava-integrationtest/src/test/java/org/biojava/nbio/structure/test/PDBFileParserTest.java
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@@ -32,8 +32,6 @@
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import java.io.IOException;
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import java.io.InputStream;
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import java.io.StringReader;
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import java.util.Calendar;
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import org.biojava.nbio.structure.Atom;
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import org.biojava.nbio.structure.Chain;
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import org.biojava.nbio.structure.ChainImpl;
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‎biojava-structure/src/main/java/org/biojava/nbio/structure/io/mmtf/MmtfStructureWriter.java‎

Copy file name to clipboardExpand all lines: biojava-structure/src/main/java/org/biojava/nbio/structure/io/mmtf/MmtfStructureWriter.java
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@@ -53,7 +53,7 @@ public MmtfStructureWriter(Structure structure, StructureAdapterInterface dataTr
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PDBHeader pdbHeader = structure.getPDBHeader();
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PDBCrystallographicInfo xtalInfo = pdbHeader.getCrystallographicInfo();
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mmtfDecoderInterface.setHeaderInfo(pdbHeader.getRfree(), pdbHeader.getRwork(), pdbHeader.getResolution(), pdbHeader.getTitle(), MmtfUtils.dateToIsoString(pdbHeader.getDepDate()),
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MmtfUtils.dateToIsoString(pdbHeader.getModDate()), MmtfUtils.techniquesToStringArray(pdbHeader.getExperimentalTechniques()));
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MmtfUtils.dateToIsoString(pdbHeader.getRelDate()), MmtfUtils.techniquesToStringArray(pdbHeader.getExperimentalTechniques()));
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mmtfDecoderInterface.setXtalInfo(MmtfUtils.getSpaceGroupAsString(xtalInfo.getSpaceGroup()), MmtfUtils.getUnitCellAsArray(xtalInfo), MmtfUtils.getNcsAsArray(xtalInfo.getNcsOperators()));
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// Store the bioassembly data
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storeBioassemblyInformation(chainIdToIndexMap, pdbHeader.getBioAssemblies());

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