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Confusing/contradictory comment in primitives.py module

Status: Open.

#561 In aqlaboratory/openfold;

· computbiolgeek opened on Dec 23, 2025

Minor documentation mismatch in atom ordering (protein.py vs residue_constants.py)

Status: Open.

#559 In aqlaboratory/openfold;

· Monikerton opened on Dec 8, 2025

Mapping Large Set of UniProt proteins to OpenProteinSet Uniclust30 MSAs & ColabFold server usage

Status: Open.

#556 In aqlaboratory/openfold;

· slee-ai opened on Nov 3, 2025

<code>python setup.py install</code> command deprecated

Status: Open.

#555 In aqlaboratory/openfold;

· BSchilperoort opened on Oct 16, 2025

Conda channel "pytorch" has been deprecated

Status: Open.

#554 In aqlaboratory/openfold;

· BSchilperoort opened on Oct 16, 2025

On <code>hmmsearch_output.sto</code>

Status: Open.

#549 In aqlaboratory/openfold;

· ulupo opened on Aug 5, 2025

where is .cif

Status: Open.

#548 In aqlaboratory/openfold;

· yuzimu1 opened on Aug 3, 2025

missing .cif files.

Status: Open.

#546 In aqlaboratory/openfold;

· yuzimu1 opened on Aug 2, 2025

$TEMPLATE_MMCIF_DIR

Status: Open.

#545 In aqlaboratory/openfold;

· yuzimu1 opened on Aug 1, 2025

Failed to download weight using download_openfold_params.sh

Status: Open.

#544 In aqlaboratory/openfold;

· zdlzglzll opened on Jul 30, 2025

Difference between <code>Rigid.make_transform_from_reference()</code> and <code>Rigid.from_3_points()</code>

Status: Open.

#542 In aqlaboratory/openfold;

· gvisani opened on Jun 27, 2025

Running the Openfold Inference for PDB 6KWC

Status: Open.

#541 In aqlaboratory/openfold;

· TonnarCastellano opened on Jun 23, 2025