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@Steinbeck-Lab

Steinbeck-Lab

Official GitHub organization for the Steinbeck group Jena, Germany
README.md
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This GitHub site is dedicated to the dissemination and management of research software developed by the Steinbeck Lab. For more information about our work and group, please visit https://cheminf.uni-jena.de. ✨

Ongoing Projects

🥥 COCONUT Database


COCONUT Stats
COCONUT Commits
COCONUT Analytics

⚡ Cheminformatics Microservice


Microservice Stats
Microservice Commits
Microservice Analytics

🔍 DECIMER - Image Transformer


DECIMER Stats
DECIMER Commits
DECIMER Transformer Analytics

🔤 DECIMER - Image Segmentation


STOUT Stats
STOUT Commits
DECIMER Segmentation Analysis

🏗️ MORTAR


MORTAR Stats
MORTAR Commits
MORTAR Analytics

🔎 Sherlock


Sherlock Stats
Sherlock Commits
Sherlock Analytics

💻 Technology Stack

Python Java JavaScript PHP C R Docker Git




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  1. coconut coconut Public

    COCONUT (COlleCtion of Open Natural prodUcTs): A comprehensive platform facilitating natural product research by providing data, tools, and services for deposition, curation, and reuse.

    PHP 45 4

  2. cheminformatics-microservice cheminformatics-microservice Public

    This set of essential and valuable microservices is designed to be accessed via API calls to support cheminformatics.

    JavaScript 61 9

  3. DECIMER-Image_Transformer DECIMER-Image_Transformer Public

    Forked from Kohulan/DECIMER-Image_Transformer

    DECIMER Image Transformer is a deep-learning-based tool designed for automated recognition of chemical structure images. Leveraging transformer architectures, the model converts chemical images int…

    Python 1

  4. MORTAR MORTAR Public

    Forked from FelixBaensch/MORTAR

    MOlecule fRagmenTAtion fRamework

    Java

  5. surge surge Public

    Forked from StructureGenerator/surge

    A Fast Chemical Graph Generator

    C 1

  6. DECIMER.ai DECIMER.ai Public

    Forked from OBrink/DECIMER.ai

    This repository contains the code for https://decimer.ai

    PHP 30 1

Repositories

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Showing 10 of 49 repositories
  • coconut Public

    COCONUT (COlleCtion of Open Natural prodUcTs): A comprehensive platform facilitating natural product research by providing data, tools, and services for deposition, curation, and reuse.

    Steinbeck-Lab/coconut’s past year of commit activity
    PHP 45 4 73 12 Updated Dec 18, 2025
  • cheminformatics-microservice Public

    This set of essential and valuable microservices is designed to be accessed via API calls to support cheminformatics.

    Steinbeck-Lab/cheminformatics-microservice’s past year of commit activity
    JavaScript 61 MIT 9 3 3 Updated Dec 2, 2025
  • DECIMER-Image_Transformer Public Forked from Kohulan/DECIMER-Image_Transformer

    DECIMER Image Transformer is a deep-learning-based tool designed for automated recognition of chemical structure images. Leveraging transformer architectures, the model converts chemical images into SMILES strings, enabling the digitization of chemical data from scanned documents, literature, and patents.

    Steinbeck-Lab/DECIMER-Image_Transformer’s past year of commit activity
    Python 1 MIT 73 0 1 Updated Nov 25, 2025
  • ART2a-Clustering-for-Java Public Forked from JonasSchaub/ART2a-Clustering-for-Java

    Implementation of the ART2a fingerprint clustering algorithm in Java.

    Steinbeck-Lab/ART2a-Clustering-for-Java’s past year of commit activity
    Java 0 MIT 2 0 0 Updated Nov 14, 2025
  • DECIMER.ai Public Forked from OBrink/DECIMER.ai

    This repository contains the code for https://decimer.ai

    Steinbeck-Lab/DECIMER.ai’s past year of commit activity
    PHP 30 MIT 13 5 0 Updated Nov 3, 2025
  • cdk Public Forked from cdk/cdk

    The Chemistry Development Kit

    Steinbeck-Lab/cdk’s past year of commit activity
    Java 0 LGPL-2.1 178 0 0 Updated Oct 2, 2025
  • SugarRemoval Public Forked from JonasSchaub/SugarRemoval

    The Sugar Removal Utility - An algorithmic approach for in silico removal of circular and linear sugars from molecular structures.

    Steinbeck-Lab/SugarRemoval’s past year of commit activity
    Java 0 MIT 2 0 0 Updated Oct 2, 2025
  • MORTAR Public Forked from FelixBaensch/MORTAR

    MOlecule fRagmenTAtion fRamework

    Steinbeck-Lab/MORTAR’s past year of commit activity
    Java 0 MIT 4 0 0 Updated Oct 2, 2025
  • nmrium Public Forked from cheminfo/nmrium

    React component to display and process nuclear magnetic resonance (NMR) spectra.

    Steinbeck-Lab/nmrium’s past year of commit activity
    TypeScript 0 MIT 34 0 0 Updated Jun 17, 2025
  • toolminutes Public Forked from lamalab-org/toolminutes
    Steinbeck-Lab/toolminutes’s past year of commit activity
    JavaScript 0 9 0 0 Updated May 5, 2025
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