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Description
I am trying to get started with RcppParallel. I have created a RcppParallel skeleton package using RcppParallel::RcppParallel.package.skeleton() (https://github.com/DillonHammill/RcppTemplate) but I cannot seem to build/document it locally on my windows machine. I have the development version of RcppParallel installed (v5.1.4-9000) and Sys.which("make") points to "C:\\rtools40\\usr\\bin\\make.exe".
This is the output of devtools::load_all():
Loading RcppTemplate
Exports from E:/Documents/R Projects/RcppTemplate/src/vector-sum.cpp:
double parallelVectorSum(NumericVector x)
E:/Documents/R Projects/RcppTemplate/src/RcppExports.cpp updated.
E:/Documents/R Projects/RcppTemplate/R/RcppExports.R updated.
Re-compiling RcppTemplate
- installing *source* package 'RcppTemplate' ...
** using staged installation
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-40~1.3/include" -DNDEBUG -I'C:/Program Files/R/R-4.0.3/library/Rcpp/include' -I'C:/Program Files/R/R-4.0.3/library/RcppParallel/include' -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -UNDEBUG -Wall -pedantic -g -O0 -fdiagnostics-color=always -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/PROGRA~1/R/R-40~1.3/include" -DNDEBUG -I'C:/Program Files/R/R-4.0.3/library/Rcpp/include' -I'C:/Program Files/R/R-4.0.3/library/RcppParallel/include' -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -UNDEBUG -Wall -pedantic -g -O0 -fdiagnostics-color=always -c vector-sum.cpp -o vector-sum.o
In file included from C:/PROGRA~1/R/R-40~1.3/include/R.h:91
from C:/Program Files/R/R-4.0.3/library/Rcpp/include/Rcpp/r/headers.h:70
from C:/Program Files/R/R-4.0.3/library/Rcpp/include/RcppCommon.h:30
from C:/Program Files/R/R-4.0.3/library/Rcpp/include/Rcpp.h:27
from vector-sum.cpp:3
C:/PROGRA~1/R/R-40~1.3/include/R_ext/RS.h:55:warning: RROR" redefined
#define ERROR ),error(R_problem_buf);}
In file included from C:/rtools40/mingw64/x86_64-w64-mingw32/include/windows.h:71
from C:/Program Files/R/R-4.0.3/library/RcppParallel/include/tthread/tinythread.h:74
from C:/Program Files/R/R-4.0.3/library/RcppParallel/include/RcppParallel/TinyThread.h:9
from C:/Program Files/R/R-4.0.3/library/RcppParallel/include/RcppParallel.h:6
from vector-sum.cpp:2
C:/rtools40/mingw64/x86_64-w64-mingw32/include/wingdi.h:75:note: this is the location of the previous definition
#define ERROR 0
In file included from C:/Program Files/R/R-4.0.3/library/RcppParallel/include/RcppParallel/TinyThread.h:7
from C:/Program Files/R/R-4.0.3/library/RcppParallel/include/RcppParallel.h:6
from vector-sum.cpp:2
C:/Program Files/R/R-4.0.3/library/RcppParallel/include/RcppParallel/Common.h: In instantiation of 'int RcppParallel::resolveValue(const char*, T, U) [with T = long long unsigned int; U = int]
C:/Program Files/R/R-4.0.3/library/RcppParallel/include/RcppParallel.h:57:28: required from 'void RcppParallel::parallelReduce(std::size_t, std::size_t, Reducer&, std::size_t, int) [with Reducer = Sum; std::size_t = long long unsigned int]
vector-sum.cpp:37:37: required from here
C:/Program Files/R/R-4.0.3/library/RcppParallel/include/RcppParallel/Common.h:16:23:warning: mparison of integer expressions of different signedness: 'long long unsigned intand 'int-Wsign-compare
if (requestedValue != defaultValueequestedValue > 0)
~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
C:/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o RcppTemplate.dll tmp.def RcppExports.o vector-sum.o -LC:PROGRA~1RR-40~1.3libraryRCPPPA~1libx64 -ltbb -ltbbmalloc -LC:/PROGRA~1/R/R-40~1.3/bin/x64 -lR
C:/rtools40/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/8.3.0/../../../../x86_64-w64-mingw32/bin/ld.exe: cannot find -ltbb
C:/rtools40/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/8.3.0/../../../../x86_64-w64-mingw32/bin/ld.exe: cannot find -ltbbmalloc
collect2.exe: error: ld returned 1 exit status
no DLL was created
ERROR: compilation failed for package 'RcppTemplate'
- removing 'C:/Users/Dillon/AppData/Local/Temp/RtmpOkW1Nu/devtools_install_379c5c243643/RcppTemplate'
Error in (function (command = NULL, args = character(), error_on_status = TRUE, :
System command 'Rcmd.exe' failed, exit status: 1, stdout + stderr (last 10 lines):
E> C:/Program Files/R/R-4.0.3/library/RcppParallel/include/RcppParallel/Common.h:16:23:warning: mparison of integer expressions of different signedness: 'long long unsigned intand 'int-Wsign-compare
E> if (requestedValue != defaultValueequestedValue > 0)
E> ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
E> C:/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o RcppTemplate.dll tmp.def RcppExports.o vector-sum.o -LC:PROGRA~1RR-40~1.3libraryRCPPPA~1libx64 -ltbb -ltbbmalloc -LC:/PROGRA~1/R/R-40~1.3/bin/x64 -lR
E> C:/rtools40/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/8.3.0/../../../../x86_64-w64-mingw32/bin/ld.exe: cannot find -ltbb
E> C:/rtools40/mingw64/bin/../lib/gcc/x86_64-w64-mingw32/8.3.0/../../../../x86
[...]
Type .Last.error.trace to see where the error occurred
Here is the output of sessionInfo():
R version 4.0.3 (2020-10-10)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 19042)
Matrix products: default
locale:
[1] LC_COLLATE=English_Australia.1252 LC_CTYPE=English_Australia.1252
[3] LC_MONETARY=English_Australia.1252 LC_NUMERIC=C
[5] LC_TIME=English_Australia.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] RcppParallel_5.1.4-9000 Rcpp_1.0.7
loaded via a namespace (and not attached):
[1] compiler_4.0.3 pillar_1.6.2 prettyunits_1.1.1 remotes_2.4.0
[5] tools_4.0.3 testthat_3.0.4 pkgbuild_1.2.0 pkgload_1.2.1.9000
[9] memoise_2.0.0 lifecycle_1.0.0 tibble_3.1.3 pkgconfig_2.0.3
[13] rlang_0.4.11 cli_3.0.0 rstudioapi_0.13 curl_4.3.2
[17] xfun_0.24 fastmap_1.1.0 xml2_1.3.2 withr_2.4.2
[21] stringr_1.4.0 roxygen2_7.1.1 knitr_1.33 desc_1.3.0
[25] fs_1.5.0 vctrs_0.3.8 devtools_2.4.2 rprojroot_2.0.2
[29] glue_1.4.2 R6_2.5.0 processx_3.5.2 fansi_0.5.0
[33] sessioninfo_1.1.1 callr_3.7.0 purrr_0.3.4 magrittr_2.0.1
[37] ps_1.6.0 ellipsis_0.3.2 usethis_2.0.1 utf8_1.2.2
[41] stringi_1.7.3 cachem_1.0.5 crayon_1.4.1
Seems like ltbb and ltbbmalloc cannot be found, though I am unsure how to rectify this issue.
Any help would be greatly appreciated.
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