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@weiwangncar
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This PR adds 3D reflectivity to output for Thompson, Thompson_aero and WSM6.

The code has been tested on Derecho with both Intel and gnu compilers and output appears in designated streams when added to stream_list.atmophsere*.

@mgduda mgduda changed the base branch from master to develop May 27, 2025 15:39
@mgduda mgduda self-requested a review May 27, 2025 15:39
@mgduda mgduda changed the base branch from develop to master May 27, 2025 16:01
This commit adds changes to the microphysics driver to capture the 3-d 10 cm
radar reflectivity to a new field, refl10cm. The refl10cm field is only
allocated when the Thompson, Thompson aerosol-aware, or WSM6 microphysics
schemes are used.

Additionally, this commit adds the refl10cm field to the 'da_state' output
stream.
@mgduda mgduda force-pushed the atmosphere/refl3d branch from 69b1b98 to 0a5ac5b Compare May 27, 2025 18:38
@mgduda mgduda changed the base branch from master to develop May 27, 2025 18:39
@mgduda mgduda merged commit bbc3ce3 into MPAS-Dev:develop May 27, 2025
mgduda added a commit that referenced this pull request Jun 3, 2025
MPAS Version 8.3.0

This release of MPAS introduces new capabilities and improvements in the
MPAS-Atmosphere model and its supporting software infrastructure. Notable
changes are listed below.

Initialization:

 * Addition of support for 30" BNU soil category dataset. The 30" BNU soil
   category dataset can be selected by setting the new namelist option
   config_soilcat_data to 'BNU' in the &data_sources namelist group. Use of this
   dataset requires a separate static dataset download. (PR #1322)

 * Addition of support for 15" MODIS land use dataset. The 15" MODIS land use
   dataset may be selected by setting the existing namelist option
   config_landuse_data to 'MODIFIED_IGBP_MODIS_NOAH_15s' in the &data_sources
   namelist group. Use of this dataset requires a separate static dataset
   download.  (PR #1322)

 * Introduction of a new namelist option, config_lu_supersample_factor, to
   control the super-sampling of land use data, which may now be on either a 30"
   or a 15" grid, depending on the choice of dataset. The existing namelist
   option config_30s_supersample_factor now controls the super-sampling for 30"
   terrain, soil category, and MODIS FPAR monthly vegetation fraction data only.
   (PR #1322)

 * A change in the horizontal interpolation from a four-point bilinear
   interpolation to a sixteen-point overlapping parabolic interpolation for both
   initial conditions and lateral boundary conditions. (PR #1303)

 * Ability to use ICON soil moisture and soil temperature fields. (PR #1298)

 * Addition of an option to skip processing of Noah-MP-only static fields in the
   init_atmosphere core. Setting the new config_noahmp_static namelist option to
   false in the &data_sources namelist group prevents the Noah-MP static fields
   from being processed when config_static_interp = true in the
   namelist.init_atmosphere file; this also permits existing static files that
   lack the Noah-MP fields 'soilcomp', 'soilcl1', 'soilcl2', 'soilcl3', and
   'soilcl4' to be used by the init_atmosphere_model program. (PR #1239)

 * Memory scaling improvements to the gravity wave drag (GWD) static field
   processing in the init_atmosphere core (when 'config_native_gwd_static =
   true') to reduce memory usage when multiple MPI ranks are used. In many
   cases, these changes eliminate the need to undersubscribe computing
   resources, which was previously required in order to work around lack of
   memory scaling in the GWD static field processing. (PR #1235)

Physics:

 * Update of the RRTMG LW and SW schemes, most notably with the addition of the
   exponential and exponential_random cloud overlap assumptions. The cloud
   overlap assumption and decorrelation length are now available as namelist
   options (config_radt_cld_overlap and config_radt_cld_dcorrlen, respectively).
   (PR #1296 and PR #1297)

 * The incorporation of NOAA's Unified Forecast System (UFS) Unified Gravity
   Wave Physics (UGWP) suite of physics parameterizations. This physics package
   is the "NOAA/GSL" orographic gravity wave drag (GWD) suite introduced in WRF
   Version 4.3 (activated by WRF namelist option 'gwd_opt=3'), but with the
   addition of a non-stationary GWD parameterization that represents gravity
   wave sources such as deep convection and frontal instability. The use of the
   UGWP suite requires additional static field downloads. (PR #1276)

Dynamics:

 * Complete port of all routines in the dynamical core to GPUs using OpenACC
   directives, including routines used by limited-area simulations. Not included
   in this release, though, is the optimization of data movement between the CPU
   and GPU memory, and the profiling and optimization of the computational
   kernels.

 * A change in the zero-gradient LBC for w to a constant value of w=0 in the
   specified zone. For limited-area configurations, the change from a
   zero-gradient boundary condition for the vertical velocity, w, to a setting
   of the vertical velocity to zero in the specified region alleviates spurious
   streamers and instabilities that appeared near the boundaries in regions of
   strong inflow.  (PR #1304)

Infrastructure:

 * Implementation of a new capability to automatically generate package logic
   code, which determines when a package is active. This package logic is
   generated by the registry at build time through the use of a new XML
   attribute, active_when, for <package> elements. (PR #1321)

Other:

 * Addition of a new Python script for setting up MPAS-Atmosphere run
   directories.  (PR #1326)

 * Addition of 3-d 10 cm radar reflectivity (refl10cm) to the 'da_state' stream,
   useful for radar DA and radar obs comparison purposes. (PR #1323)
HingOng added a commit to HingOng/MPAS-Model that referenced this pull request Jul 7, 2025
MPAS Version 8.3.0

This release of MPAS introduces new capabilities and improvements in the
MPAS-Atmosphere model and its supporting software infrastructure. Notable
changes are listed below.

Initialization:

 * Addition of support for 30" BNU soil category dataset. The 30" BNU soil
   category dataset can be selected by setting the new namelist option
   config_soilcat_data to 'BNU' in the &data_sources namelist group. Use of this
   dataset requires a separate static dataset download. (PR MPAS-Dev#1322)

 * Addition of support for 15" MODIS land use dataset. The 15" MODIS land use
   dataset may be selected by setting the existing namelist option
   config_landuse_data to 'MODIFIED_IGBP_MODIS_NOAH_15s' in the &data_sources
   namelist group. Use of this dataset requires a separate static dataset
   download.  (PR MPAS-Dev#1322)

 * Introduction of a new namelist option, config_lu_supersample_factor, to
   control the super-sampling of land use data, which may now be on either a 30"
   or a 15" grid, depending on the choice of dataset. The existing namelist
   option config_30s_supersample_factor now controls the super-sampling for 30"
   terrain, soil category, and MODIS FPAR monthly vegetation fraction data only.
   (PR MPAS-Dev#1322)

 * A change in the horizontal interpolation from a four-point bilinear
   interpolation to a sixteen-point overlapping parabolic interpolation for both
   initial conditions and lateral boundary conditions. (PR MPAS-Dev#1303)

 * Ability to use ICON soil moisture and soil temperature fields. (PR MPAS-Dev#1298)

 * Addition of an option to skip processing of Noah-MP-only static fields in the
   init_atmosphere core. Setting the new config_noahmp_static namelist option to
   false in the &data_sources namelist group prevents the Noah-MP static fields
   from being processed when config_static_interp = true in the
   namelist.init_atmosphere file; this also permits existing static files that
   lack the Noah-MP fields 'soilcomp', 'soilcl1', 'soilcl2', 'soilcl3', and
   'soilcl4' to be used by the init_atmosphere_model program. (PR MPAS-Dev#1239)

 * Memory scaling improvements to the gravity wave drag (GWD) static field
   processing in the init_atmosphere core (when 'config_native_gwd_static =
   true') to reduce memory usage when multiple MPI ranks are used. In many
   cases, these changes eliminate the need to undersubscribe computing
   resources, which was previously required in order to work around lack of
   memory scaling in the GWD static field processing. (PR MPAS-Dev#1235)

Physics:

 * Update of the RRTMG LW and SW schemes, most notably with the addition of the
   exponential and exponential_random cloud overlap assumptions. The cloud
   overlap assumption and decorrelation length are now available as namelist
   options (config_radt_cld_overlap and config_radt_cld_dcorrlen, respectively).
   (PR MPAS-Dev#1296 and PR MPAS-Dev#1297)

 * The incorporation of NOAA's Unified Forecast System (UFS) Unified Gravity
   Wave Physics (UGWP) suite of physics parameterizations. This physics package
   is the "NOAA/GSL" orographic gravity wave drag (GWD) suite introduced in WRF
   Version 4.3 (activated by WRF namelist option 'gwd_opt=3'), but with the
   addition of a non-stationary GWD parameterization that represents gravity
   wave sources such as deep convection and frontal instability. The use of the
   UGWP suite requires additional static field downloads. (PR MPAS-Dev#1276)

Dynamics:

 * Complete port of all routines in the dynamical core to GPUs using OpenACC
   directives, including routines used by limited-area simulations. Not included
   in this release, though, is the optimization of data movement between the CPU
   and GPU memory, and the profiling and optimization of the computational
   kernels.

 * A change in the zero-gradient LBC for w to a constant value of w=0 in the
   specified zone. For limited-area configurations, the change from a
   zero-gradient boundary condition for the vertical velocity, w, to a setting
   of the vertical velocity to zero in the specified region alleviates spurious
   streamers and instabilities that appeared near the boundaries in regions of
   strong inflow.  (PR MPAS-Dev#1304)

Infrastructure:

 * Implementation of a new capability to automatically generate package logic
   code, which determines when a package is active. This package logic is
   generated by the registry at build time through the use of a new XML
   attribute, active_when, for <package> elements. (PR MPAS-Dev#1321)

Other:

 * Addition of a new Python script for setting up MPAS-Atmosphere run
   directories.  (PR MPAS-Dev#1326)

 * Addition of 3-d 10 cm radar reflectivity (refl10cm) to the 'da_state' stream,
   useful for radar DA and radar obs comparison purposes. (PR MPAS-Dev#1323)
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