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1. ANCOMBC ANCOMBC Public

   Differential abundance (DA) and correlation analyses for microbial absolute abundance data

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2. ANCOM-Code-Archive ANCOM-Code-Archive Public

   Archive: R functions for Analysis of Composition of Microbiomes (ANCOM). Please check our ANCOMBC R package for the most up-to-date ANCOM function.

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3. ANCOM-BC-Code-Archive ANCOM-BC-Code-Archive Public

   Archive: Data, scripts, and outputs for the Nat. Comm. paper "Analysis of Composition of Microbiomes with Bias Correction". Please check our ANCOMBC R package for the most up-to-date ANCOM-BC funct…

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4. Microbiome-Review-Code-Archive Microbiome-Review-Code-Archive Public

   Data, scripts, and outputs for the npj Biofilms and Microbiomes paper "Analysis of microbial compositions: A review of normalization and differential abundance analysis"

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5. SECOM-Code-Archive SECOM-Code-Archive Public

   Archive: Data, scripts, and outputs for the paper "Sparse Estimation of Correlations among Microbiomes (SECOM)". Please check our ANCOMBC R package for the most up-to-date SECOM functions.

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6. MetVAE-PyPI MetVAE-PyPI Public

   MetVAE PyPI code repository

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