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@EddyRivasLab

The Eddy/Rivas Laboratory

Computational genome sequence analysis, especially of RNA

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  1. hmmer hmmer Public

    HMMER: biological sequence analysis using profile HMMs

    C 393 88

  2. infernal infernal Public

    RNA secondary structure/sequence profiles for homology search and alignment

    C 122 28

  3. easel easel Public

    Sequence analysis library used by Eddy/Rivas lab code

    C 51 30

  4. R-scape R-scape Public

    RNA Structural Covariation Above Phylogenetic Expectation

    C 18 3

  5. ssu-align ssu-align Public

    Structural alignment of SSU rRNA sequences

    PostScript 5

  6. tornado tornado Public

    A general purpose parser to produce grammars of single-sequence RNA secondary structure

    C 4 3

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